CDS
| Accession Number | TCMCG015C14126 |
| gbkey | CDS |
| Protein Id | XP_027111720.1 |
| Location | complement(join(10495007..10495067,10495357..10495425,10495539..10495655,10496583..10496695,10496783..10496857,10497188..10497310,10498478..10498737,10498821..10498877,10499532..10500047,10500535..10500712,10500909..10501052,10501138..10501212,10502425..10502495,10502776..10502878,10502958..10503184,10504252..10504369,10505351..10505481,10505840..10505864)) |
| Gene | LOC113730924 |
| GeneID | 113730924 |
| Organism | Coffea arabica |
Protein
| Length | 820aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027255919.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCCAAGCGCGGATATAAATTGCAGGAGTTTGTGGCGCATTCGGGGAATGTAAATTGTTTAAGGATTGGGAGGAAGAACTTTCGGCAATTTATAACAGGTGGAGATGATCAAGTGGTCAATCTTTGGTCAATTGGCAATCCTGCACCTTTATCGAGTCTTTCTGGTCACTCAAGTCCAGTTGAATCTGTAGCTTTTGATTCTTCGGAGATCTTGGTGGTTGCCGGAGCATCATCTGGTGTAATTAAATTGTGGGACCTTGAAGAAACAAAGATGGTTCGCACTCTTTCTGGACACAGATCCTATTGCACTGCTGTGGAATTCCATCCATTTGGTGAATTTTTTGCATCTGGTTCCATGGACACTAATCTAAAGATATGGGATATCAGAAAGAAAGGATGCATTCATACATATAAGGGTCATACTCGAGGAATTAGCACTATAAGGTTTACTCCTGATGGCCGATGGGTGGTTTCTGGTGGATTTGATAATGTTGTAAAGATATGGGACCTGACAGCTGGAAAACTCTTGCATGATTTCAAGTTTCATGAAGGACATATCCGATCAATAGACTTCCATCCACTTGAATTTCTTCTGGCTACAGGCTCAGCGGATCGAACTGTTAAGTTTTGGGATTTGGAAACTTTTGAAATGATTGGGTCTGCCAGGCGTGAGACTGCTGGAGTTCGATCCATAACGTTTCACCCTGATGGAAGAACGCTATTCTGTGGATTGGATGATAGTTTGAAGGTGTATTCATGGGAGCCAGTAATTTGTCATGACTCTGTTGATATGGGATGGTCAACACTAGGTGATATGTGCGTCCATGATGGTAAACTCTTGGGTGGTGCTTATTTTCAGAACTCTGTTGGAGTTTGGGTAGCTGATATTTCGCTTATTGAGCCATATGGTGGGGGTGCGATACCTGAGCTGAATGGCCCACCTGAGCAGAAATATGAAGTTCAAGAAAATCCTTCTGAGAAATCCGTAAGCCATAGGAGGTCCAATTCAAATTTCCGCAGCATGTCACCAGATATTGATTCTAAAGACATTAAGAATATCTATGTGGATACTTGTAAGCCTGTTACTTCAACAAAAGTTGGGTCTCTTAATTCTCCAAATGCTGTAGACCCTTCTGAACCAAAGGAGATTACGACTTTGGCAAGTCAGAAGCAGGGCTCTGCGGTAAGGGTGCATGCAAAGACTAATGTGTCAGGGGATGCCAAATCCTTCATTGTGCCTATAGTGATACCTCGTGAATATCCTAGTGCAAAAGATAAGGCCGGTTCTAGAAGGGAATCTTTTGCTAGCAGTAGGGCCATTACTGGTACACTTAAGCCTTCCCATATCCGAAGGTCGTCAAATACAAAGTCTGATATGGAGAAAATCTCAACTGGATTGGAAACCATGTCCCTTGGCAGTATGACGACTGCAGTGGAGACTAAAACGGAACCAAACTTCAACAGCAAGCTTGTTTGCAACAATAATGTGAAGGAATTCTCTGAGGGAGAAGATCTGAGCATCAAGAATGTTGGAGAGAAGCTAGAAAAAGCTACATCGCTGACAAGACTGTCAAATCAGGAAAATGGTGAAAAGCCCCAGGAGTGCAACAAAGGGGTTATTCCTATTAGAGTTGTGAATGGAGTGGCAGTTGTGCGAGGTAGGACACGCAGTTTGGTTGAGAGATTTGAAAAAAGAGAGGGATTGAGTAGTAATGAAGCTCAAACGCCTGAGAAAGCTCCTAACTTTAGTAGCGAAGAAGCTCAAACGCCTGAGAAAGCTCCTAACTTTAGTAGCAAAGAAGCTCAAATGCCTGAGAATGCTCCTAACTTCAGTAGCAAAGAAGCTCAAATGCCTGACAGATGTCCTAGTTCAATAACTGAGGCAGCTAAAGCATCTTTGCAGGATAATAATCCACCAAATGCTGGAAGGGAGCCAGATACAGATGATAATCATGCCATTGAAGCGCTGATGCAAAATCATGACGTGCTATTAAGCACTTTTCGGTCACGCCTGACAAAGTTACAAGTGGTGCGGCATTTTTGGGAACGCAATGATGTTAAAGGTGCAATAAATGCTATGATGAAGTTGCCTGATCATTCTGTACAAGCAGATGTAGTCAGTGTTCTAAAGGAGAAAATGGAGATTATTACCTTAGAGCTCTTCTCATGCTTACTACCTGTGCTTTTAAGCTTACTGGATAGCAAAATTGATAGGCATGCTAGTGTTTCTCTGGAGATGCTCTTGAAACTCATTGCCGTCTTCGGACCTTTAGTTCATTCAACCGTTTCAGCACCTCGTGCTGTTGGGGTTGATCTTCATGCAGAAGAAAGACGTGAAAGCTGCAAACAGTGTTTTGTCCATCTTCAGAATGTTCAGAAAATTCTTCCGTCACTGATTCAGAGGGGTGGTGTGGTGGCAAGATGTGCACATGAACTAAGCCTTGTTCTTCGAGAACCGTAA |
| Protein: MAKRGYKLQEFVAHSGNVNCLRIGRKNFRQFITGGDDQVVNLWSIGNPAPLSSLSGHSSPVESVAFDSSEILVVAGASSGVIKLWDLEETKMVRTLSGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKIWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFEMIGSARRETAGVRSITFHPDGRTLFCGLDDSLKVYSWEPVICHDSVDMGWSTLGDMCVHDGKLLGGAYFQNSVGVWVADISLIEPYGGGAIPELNGPPEQKYEVQENPSEKSVSHRRSNSNFRSMSPDIDSKDIKNIYVDTCKPVTSTKVGSLNSPNAVDPSEPKEITTLASQKQGSAVRVHAKTNVSGDAKSFIVPIVIPREYPSAKDKAGSRRESFASSRAITGTLKPSHIRRSSNTKSDMEKISTGLETMSLGSMTTAVETKTEPNFNSKLVCNNNVKEFSEGEDLSIKNVGEKLEKATSLTRLSNQENGEKPQECNKGVIPIRVVNGVAVVRGRTRSLVERFEKREGLSSNEAQTPEKAPNFSSEEAQTPEKAPNFSSKEAQMPENAPNFSSKEAQMPDRCPSSITEAAKASLQDNNPPNAGREPDTDDNHAIEALMQNHDVLLSTFRSRLTKLQVVRHFWERNDVKGAINAMMKLPDHSVQADVVSVLKEKMEIITLELFSCLLPVLLSLLDSKIDRHASVSLEMLLKLIAVFGPLVHSTVSAPRAVGVDLHAEERRESCKQCFVHLQNVQKILPSLIQRGGVVARCAHELSLVLREP |